Makes list of superposition values to augment KMAD alignments
Methods
This server expects exactly two proteins to be present in the input file. It will then
superpose each 15-mer in the one structure on all 15-mers in the other structure and
spit out the resulting RMS misfit on the alpha carbons in that value is less than 12.0.
Length of fragment, output cut-off, etc can be cahnged upon request.
KMAD augmentation
If you have detected any error, or have any question or suggestion,
please send an Email to Gert Vriend.
Roland Krause, Maarten L Hekkelman, Jens E Nielsen,
Gert Vriend.
