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Trailing-trace superposition


Introduction

Makes list of superposition values to augment KMAD alignments

Methods

This server expects exactly two proteins to be present in the input file. It will then superpose each 15-mer in the one structure on all 15-mers in the other structure and spit out the resulting RMS misfit on the alpha carbons in that value is less than 12.0. Length of fragment, output cut-off, etc can be cahnged upon request.
Either Choose a pdb-file,
Or Choose your own file

KMAD augmentation If you have detected any error, or have any question or suggestion, please send an Email to Gert Vriend.
Roland Krause, Maarten L Hekkelman, Jens E Nielsen, Gert Vriend.


Last modified Mon Jan 29 12:33:00 2018