Material linked from bioinformatics course


We applied the grep operations:
find . -name "*" -print | xargs fgrep "REMARK 900" | fgrep "EC:"
(which means: look in all pdb files for REMARK 900 cards that have the text EC: somewhere on them) to the whole PDB and got no more than:

pdb1f6y.ent:REMARK 900 DIHYDROPTEROATE SYNTHETASE; CHAIN: A, B; SYNONYM: DHPS; EC:
pdb1f6y.ent:REMARK 900 DIHYDROPTEROATE SYNTHETASE; CHAIN: A, B; SYNONYM: DHPS; EC:
pdb1f6y.ent:REMARK 900 DIHYDROPTEROATE SYNTHASE; CHAIN: NULL; SYNONYM: DHPS; EC:
pdb1f6y.ent:REMARK 900 DIHYDROPTEROATE SYNTHASE; CHAIN: NULL; SYNONYM: DHPS; EC:
pdb1f6y.ent:REMARK 900 DIHYDROPTEROATE SYNTHASE; CHAIN: NULL; SYNONYM: DHPS; EC:
pdb2cmy.ent:REMARK 900  NULL; EC: 3.4.21.4; HETEROGEN: N-[3-[4
pdb2cmy.ent:REMARK 900  ; EC: 3.4.21.4; MOL_ID: 2; MOLECULE: T
pdb2cmy.ent:REMARK 900  ; EC: 3.4.21.4; MOL_ID: 2; MOLECULE: T
pdb2cmy.ent:REMARK 900  NULL; EC: 3.4.21.4; HETEROGEN: BENZAMIDINE
pdb2cmy.ent:REMARK 900  ; EC: 3.4.21.4; MOL_ID: 2; MOLECULE: T
pdb2j9n.ent:REMARK 900  NULL; EC: 3.4.21.4; HETEROGEN: N-[3-[4
pdb2j9n.ent:REMARK 900  ; EC: 3.4.21.4; MOL_ID: 2; MOLECULE: T
pdb2j9n.ent:REMARK 900  ; EC: 3.4.21.4; MOL_ID: 2; MOLECULE: T
pdb2j9n.ent:REMARK 900  NULL; EC: 3.4.21.4; HETEROGEN: BENZAMIDINE
pdb2j9n.ent:REMARK 900  ; EC: 3.4.21.4; MOL_ID: 2; MOLECULE: T
pdb2v5l.ent:REMARK 900  ; CHAIN: NULL; EC: 5.3.1.1; ENGINEERED:
pdb2v5l.ent:REMARK 900  ; CHAIN: NULL; EC: 5.3.1.1; MUTATION:
pdb2uuf.ent:REMARK 900  L, H; EC: 3.4.21.5; MOL_ID: 2;
pdb2uuf.ent:REMARK 900  L, H; EC: 3.4.21.5; MOL_ID: 2;
pdb2uuj.ent:REMARK 900  L, H; EC: 3.4.21.5; MOL_ID: 2;
pdb2uuj.ent:REMARK 900  L, H; EC: 3.4.21.5; MOL_ID: 2;
pdb2uuk.ent:REMARK 900  L, H; EC: 3.4.21.5; MOL_ID: 2;
pdb2uuk.ent:REMARK 900  L, H; EC: 3.4.21.5; MOL_ID: 2;
pdb2vb1.ent:REMARK 900  ; EC: 3.2.1.17